学科分类
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1 个结果
  • 简介:Seventy-fivepreviouslyknownplantmicroRNAs(miRNAs)wereclassifiedinto14familiesaccordingtotheirgenesequenceidentity.Atotalof18,694plantexpressedsequencetags(EST)werefoundintheGenBankESTdatabasesbycomparingallpreviouslyknownArabidopsismiRNAstoGenBank'splantESTdatabaseswithBLASTalgorithms.AfterremovingtheESTsequenceswithhighnumbers(morethan2)ofmismatchednucleotides,atotalof812ESTcontigswereidentified.AfterpredictingandscoringtheRNAsecondarystructureofthe812ESTsequencesusingmFoldsoftware,338newpotentialmiRNAswereidentifiedin60plantspecies,miRNAsarewidespread.SomemicroRNAsmayhighlyconserveintheplantkingdom,andtheymayhavethesameancestorinveryearlyevolution.ThereisnonucleotidesubstitutioninmostmiRNAsamongmanyplantspecies.SomeofthenewidentifiedpotentialmiRNAsmaybeinducedandregulatedbyenvironmentalbioticandabioticstresses.Somemaybepreferentiallyexpressedinspecifictissues,andareregulatedbydevelopmentalswitching.ThesefindingssuggestthatESTanalysisisagoodalternativestrategyforidentifyingnewmiRNAcandidates,theirtargets,andothergenes.AlargenumberofmiRNAsexistindifferentplantspeciesandplayimportantrolesinplantdevelopmentalswitchingandplantresponsestoenvironmentalabioticandbioticstressesaswellassignaltransduction.EnvironmentalstressesanddevelopmentalswitchingmaybethesignalsforsynthesisandregulationofmiRNAsinplants.AmodelformiRNAinductionandexpression,andgeneregulationbymiRNAishypothesized.

  • 标签: RNA 植物 环境胁迫 基因表达 表达序列标签 鉴定