GALT Protein Database, a Bioinformatics Resource for the Management and Analysis of Structural Features of a Galactosemia-related Protein and Its Mutants

(整期优先)网络出版时间:2009-01-11
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WedescribetheGALT-Protdatabaseanditsrelatedweb-basedapplicationthathavebeendevelopedtocollectinformationaboutthestructuralandfunctionaleffectsofmutationsonthehumanenzymegalactose-1-phosphateuridyltransferase(GALT)involvedinthegeneticdiseasenamedgalactosemiatypeI.Besidesalistofmissensemutationsatgeneandproteinsequencelevels,GALT-ProtreportstheanalysisresultsofmutantGALTstructures.Inadditiontothestructuralinformationaboutthewild-typeenzyme,thedatabasealsoincludesstructuresofover100singlepointmutantssimulatedbymeansofacomputationalprocedure,andtheanalysistoeachmutantwasmadewithseveralbioinformaticsprogramsinordertoinvestigatetheeffectofthemutations.Theweb-basedinterfaceallowsqueryingofthedatabase,andseverallinksarealsoprovidedinordertoguaranteeahighintegrationwithotherresourcesalreadypresentontheweb.Moreover,thearchitectureofthedatabaseandthewebapplicationisflexibleandcanbeeasilyadaptedtostoredatarelatedtootherproteinswithpointmutations.GALT-Protisfreelyavailableathttp://bioinformatica.isa.cnr.it/GALT/.