简介:使用含512个已知水稻基因3'表达序列标签的cDNA微阵列检测了萌发期水稻幼苗的基因表达谱.313个基因产生了可靠的杂交信号.其中,天冬氨酸氨基转移酶基因和4个具有核糖体功能的基因表达丰度非常高,表明萌发期幼苗中的氨基酸和蛋白质的合成代谢很活跃.β-1,3-葡聚糖酶基因是一种典型的病程相关基因,该基因的高水平表达,表明幼苗中存在着一种高度发育的抗病机制.实验也发现编码一种重要的抑制细胞凋亡的基因-Baxinhibitor-1,在幼苗中的表达丰度很高;该结果可解释为什么正常的幼苗中很少发生细胞程序性死亡现象.实验所测定的大量基因的表达丰度有助于从基因组转录水平理解萌发幼苗的生理特点.
简介:对木头开发和形成的分子的生物研究是相关基因的发现的最近的年,而是步里的焦点,他们在木头性质的控制的函数是慢的。它在另外的工具上的高产量能力,敏感,和可靠性的优点为调查能够的基因表示patternsis开发了的microarraytechniquewith很快assaying几千基因。在这研究,从开发白杨木部纸巾的二个cDNA图书馆准备的cDNAmicroarray从Populusdeltoides的主要的茎在不同高度在不成熟的木部纸巾习惯于试金基因表示模式(15?岁),它被证实有不同木头性质(microfibrillar角度,木质的密度)旁边X光检查。有在薄片之间的微分表示侧面的274个抄本外面被屏蔽,并且单个克隆受到5定序。用生物信息的分析,我们识别了可以影响白杨木头性质的候选人基因,许多哪个属于各种各样规章并且信号transduction基因家庭例如锌手指蛋白质抄写因素,DNA有约束力的抄写因素,乙烯反应因素等等。结果建议这些基因可以调整涉及木头形成的酶。进一步的工作将被执行克隆这些基因并且决定他们怎么影响白杨木头性质。
简介:Phytohormoneabscisicacid(ABA)wascriticalformanyplantgrowthanddevelopmentalprocessesincludingseedmaturation,germinationandresponsetoenvironmentalfactors.WiththepurposetodetectthepossibleABArelatedsignaltransductionpathways,wetriedtoisolateABA-regulatedgenesthroughcDNAmacroarraytechnologyusingABA-treatedriceseedlingasmaterials(undertreatmentfor2,4,8and12h).Of6144cDNAclonestested,37differentialclonesshowinginductionorsuppressionforatleastonetime,wereisolated.Ofthem30and7wereup-ordown-regulatedrespectively.Sequenceanalysesrevealedthattheputativeencodedproteinswereinvolvedindifferentpossibleprocesses,includingtranscription,metabolismandresistance,photosynthesis,signaltransduction,andseedmaturation.6cDNAcloneswerefoundtoencodeproteinswithunknownfunctions.RegulationbyABAof7selectedclonesrelatingtosignaltransductionormetabolismwasconfirmedbyreversetranscriptionPCR.Inaddition,somecloneswerefurthershowntoberegulatedbyotherplantgrowthregulatorsincludingauxinandbrassinosteroid,which,however,indicatedthecomplicatedinteractionsofplanthormones.PossiblesignaltransductionpathwaysinvolvedinABAwerediscussed.
简介:FemaleinflorescenceofBetulaplatyphyllawassampledatanintervalofeachtwodaystoanalyzethebackgroundofgeneexpressioninfloralphase.OnthebasisofSMARTstrategy,thedrivercDNAwasobtainedfromtotalRNAofthelastsampleandthetestercDNAwasfromthatoftheothersbyRT-PCRwhichweresubsequentlyusedtoconstructasubtractedcDNAlibrary.TheresultoftheESTs(expressionsequencetags)blastXshowedthatthegenesinthesubtractedcDNAlibrarycouldbemainlyclusteredinto5groupsrelatedtometabolism,transportationandsignaltransduction,cellcycle,stressresponse,andregulation.Therelationshipbetweengeneexpressionanddevelopmentwasalsodiscussed.
简介:Objective:Toclonemultidrugresistance(MDR)relatedgenesinlungadenocarcinomacelllines.Methods:ThedifferentiallyexpressedcDNAfragmentsbetweenA549andA549DDPcellswereanalyzedbymRNAdifferentialdisplayPCR(DDRT-PCR).ThefragmentsthusobtainedwerefurtheranalyzedbyDNAsequencingandNorthernblotting.Results:ThreedifferentiallyexpressedcDNAfragmentswereobtainedandconfirmedbyNorthernblot.Sequenceanalysisrevealedthattwoofthemwerenovelandonewas100%identicalwithICEgene.Conclusion:AnalyzingdifferentiallyexpressedfragmentbetweenA549andA549DDPcellsmaybehelpfulforfindingnewMDRrelatedgenes.ThedrugresistanceofA549DDPcellsmayberelatedtotheinhibitionordown-regulationofICEgene.
简介:目的:克隆COPS3基因cDNA,构建其原核融合蛋白表达载体并表达和鉴定。方法:从培养的人骨肉瘤细胞系SOSP-9607细胞中提取总RNA,经RT-PCR获得COPS3基因。将该基因克隆到pGEM-T-Easy载体中,酶切及测序鉴定。将COPS3基因插入pET28a融合蛋白表达载体中,IPTG诱导表达,进行SDS-PAGE分析。免疫印迹法鉴定COPS3蛋白的表达。结果:cDNA测序证明,获得了COPS3基因cDNA,其序列与Genebank中报道序列完全一致。酶切分析表明,成功构建了含COPS3基因的pET28a融合蛋白表达载体。SDS-PAGE以及免疫印迹法鉴定分析表明,COPS3蛋白获得高效表达,分子质量为51Ku,表达量约占菌体总蛋白的30%。结论:成功克隆和表达了COPS3cDNA。
简介:TherootofPanaxginsengplantundergoesaspecificdevelopmentalprocesstobecomeabiosynthesisandaccumulationtissueforginsenosides.Toidentifyandanalyzegenesinvolvedinthebiosynthesisofginsenoside,weconstructedandcharacterizedafull-lengthcDNAlibraryfor6-year-oldNorthAmericanginseng.ThetiterofprimarycDNAlibraryis1.2×106pfu/mL,thetiterofamplifiedlibraryis2.6×1010pfu/mLandtherateofrecombinantisabove86%.Theinsertsizerangesfrom0.3to2.0kb.Sequencingresultsshowthat18of58genesarehighhomologoustothegenes(GBR5,GBR3andGBR1)knowninGenBank,whichareinvolvedinbiosynthesisofginsenosideinNorthAmericanginsengplant;16of58genesarenovelgenes.Thefull-lengthcDNAlibraryofNorthAmericanginsengroottissuesisessentialforthecloningofgenesknownanditisalsoaninitialkeyforthescreeningandcloningofnewgenes.
简介:Objective:Toanalyzethechangesofgeneexpressioninphenylbutyrateinduceddifferentiationofgliomacells.Methods:Theexpressionlevelsof14000genesingliomacellsbeforeandafterinducementwithsodiumphenyl-butyratefor2hor6dayswereevaluatedbycDNAarraytechniqueandprovedbymulti-dotblotting.Results:expressionof98genesingliomacellsshowedchangesaftertheinducement.Somegenesinvolvedintranscriptionandtranslationandsomeoncogenesaredown-regulated,whilesomegeneinvolvedindifferentiationorapoptosisareup-regulated.18unknownexpressionsequencingtag(EST)changedtoo.Conclusion:Ageneexpressionprofileassociatedwithdifferentiationofgliomacellswasestablished.
简介:Throughexploitingthehighhomologyofcerealcropgenes,membranouscDNAmicroarrayscontaining3311uniquericetranscripts(including1639cndosperm-derivedtranscriptsand1672maturestem-derivedtranscripts)wereusedformonitoringtheexpressionprofilesofl-leafstageseedlingsof4cerealcropspecies:rice,maize,sorghumandbarley.Afterhybridizingwith[P]labeledprobes,73.6%ofthearrayedgenesgeneratedreliablesignalsinallofthefourcerealcrops.Furtheranalysisrevealedthatamongthearrayedgenes,ahigherpercentageoftheendosperm-derivedtranscripts(86.6%)expressedthanthatofthematurestem-derivedgenes(60.9%),indicatingthatmostoftheendospermexpressedgenesfunctionedinyoungseedlingswhilcconsiderableamountofmaturestemtissueexpressedgenesdidnotexpress.Theseresultsalsoinferredthatsomegenesmightfunctiononlyatcertaindevelopmentalstages.Bycomparingtheobtainedprofdes,84geneswereidentifiedconstantlyexpressedinallthefourcerealcrops.Manyhousekeepinggenes,suchaspolyubiquitin,ubiquitinconjugatingenzymeandribosomalproteinswereincludedinthiscatalogue.Theexperimentalsoidentified14riceseedlingspecificallyexpressedgenes,including3bioticandabioticstressinducedgenesand1apoptosissuppressorencodinggeneBaxinhibitor-1.Thisinvestigationprovidedinvaluableinformationforcomparativegenomicsofgramineaemembers.
简介:Twostarch-branchingenzyme(SBE)inrice,isknowntobeakeyenzymeinamylopectinbiosynthesis.ThecDNAoftwoSBE(starch-branchingenzyme)genesSheIandShedencodingSBEⅠandSBEⅢ(twomajorisoformsinrice)wereclonedbyanimprovedRT-PCRtechnique,fromatemplatecDNAlibray,derivedfromthetotalmRNAsextractedfromtheimmatureseedsofajaponicariceWuyunjing7.DNAsequenceanalysisshowedthatthesizeoftheclonedSheIandShedcDNAswere2490and2481bplong,respectively,includingtheirentirecodingsequences.ComparisonanalysisindicatedthatthenucleotidesequenceofShe3wasthesameasthatofshed(GenbankAccessionNo.D16201)asreportedpreviously.Therewereonlyfourbase-pairsdifference,whichresultedinchangesoftwodeducedaminoacidsbetweentheclonedShe1cDNAandthereportedshe1(GenbankAccessionNo.D11082).TheclonedSheIandShedcDNAsmakeitpossibletoimprovericestarchqualitythroughgeneticengineering.